CDS

Accession Number TCMCG007C08378
gbkey CDS
Protein Id XP_009104927.1
Location complement(join(19426649..19426706,19426790..19426917,19427036..19427089,19427191..19427256,19427377..19427442,19427529..19427627,19427723..19428119,19428240..19428559))
Gene LOC103830854
GeneID 103830854
Organism Brassica rapa

Protein

Length 395aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009106679.3
Definition transcription factor bHLH112 isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description helix loop helix domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000820        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0000977        [VIEW IN EMBL-EBI]
GO:0000978        [VIEW IN EMBL-EBI]
GO:0000981        [VIEW IN EMBL-EBI]
GO:0000987        [VIEW IN EMBL-EBI]
GO:0001012        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0001228        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006521        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010565        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0033238        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042631        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0062012        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071215        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071462        [VIEW IN EMBL-EBI]
GO:0071470        [VIEW IN EMBL-EBI]
GO:0071472        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097306        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000214        [VIEW IN EMBL-EBI]
GO:2000377        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGATGAGTTTCAAGCTACGGCAGCAATTTGCGGTAGCGGAGGCGGTGCTTGGTGGAGCTCGCCGAGAAGCGTTATGTCTCCTTCGGATCATTTCTTGTCGCCTTATTTCGGAGCTACAATCACTTCCGATGATTTTGGCTTTCAAGAGAATAATATCAAATCTAGGAATACTTGTACAGACAACAACATCATTTCTGGGCAGCGAGAGGCCGATTCCGACAGTGGAGGAAGCACCGTGACGATTGACTCGACGATGCAAATGATGGGTCTAGGGTTTTCCTCGAACTCTTCTTCAGATTGGAACCACACAATTTTACAGGAAGACTTAAACTCAAGCTTCTTAAGGAGCTCACAAAATCATGGCCAAGGATTCTCATCGACAACTGCTTCACCTTATCTTCTTAATCCAGCTTGCTCTTCAACTTCTTCTTCCTCGAGCTTGTTACGAACCTTTTATGATCCCGAACCGAACCCGTACAGCTTCGTTTCCACCACTAGCTGCTCCTTAAACAACCCTCACGCCTCTTGGGCTAATAAAAAGATAAATCCTAATCATCAAGCTTCTTATGGACTAATTAACAACTTCTCTGACAACACAAACTCTCTACCCTTTTGGAGTTCTTCATTAACCACTAACTTAAATAACACGACGCATAACAGTTATGTAACCACTCCGCTGATAATACCCCCTCGTGTTGACGATAAAACCAAGACAAGAGGCCAGAGTGAGTCTTTGAAGAGAGGAAAGTACAATGAACCTGCGTCGAAGAAACAGAGAGTTACCACGCCTTCACCCTTGCCAAATTTTAAGGTGAGAAAAGAGAACCTAAGGGACCAGATTACTTCATTGCAACAGCTGGTTTCACCTTTCGGAAAGACAGATACCGCATCGGTTCTCCAAGAAGCTATAGAGTACATCAAGTTCCTTCACGATCAAGTCACTGTTCTAAGTACTCCATACATGAAACAAGGTGCCCCGATCCATCAACAACAGCAGGATGGAAACGATAATCAAGAACTAAGAGCACACGGTCTATGTCTCGTCCCGATATCAAGCACTTTTCCGGTGGCTAATGAAACAACCGCCGATTTTTGGACACCGACGTTTGGGGGAAACAATTTCAGAAAAATAAAATTCGCAAGTCATGATCAAAGATTGAATCATTACTTGGAGAAAAAGTAG
Protein:  
MADEFQATAAICGSGGGAWWSSPRSVMSPSDHFLSPYFGATITSDDFGFQENNIKSRNTCTDNNIISGQREADSDSGGSTVTIDSTMQMMGLGFSSNSSSDWNHTILQEDLNSSFLRSSQNHGQGFSSTTASPYLLNPACSSTSSSSSLLRTFYDPEPNPYSFVSTTSCSLNNPHASWANKKINPNHQASYGLINNFSDNTNSLPFWSSSLTTNLNNTTHNSYVTTPLIIPPRVDDKTKTRGQSESLKRGKYNEPASKKQRVTTPSPLPNFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMKQGAPIHQQQQDGNDNQELRAHGLCLVPISSTFPVANETTADFWTPTFGGNNFRKIKFASHDQRLNHYLEKK